华中农业大学植物科学技术学院导师介绍：章元明

导师信息来源：中国半岛真人体育 2015-07-12　相关院校：华中农业大学

基本信息姓名: 章元明出生年月: 1965.5
性别: 男硕/博导：博导
民族: 汉开设课程：数量遗传学（研究生课程）
职称: 教授研究方向：统计基因组学、基因分子进化、大豆遗传学
学位: 农学博士

联系方式办公电话：
电子邮件：soyzhang@mail.hzau.edu.cn

个人简介调剂信息：
欢迎2015年报考数学专业、统计学专业、生物信息学专业、计算机科学专业、生物科学与农学专业硕士研究生调剂到统计基因组学团队！与章元明教授(soyzhang@mail.hzau.edu.cn)联系。

主要研究方向：
1、统计基因组学：目前从事海量数据的遗传分析方法研究。代表性论文：提出惩罚最大
似然方法（Heredity, SCI引用>50），参与提出Bayesian压缩估计方法（Genetics,
SCI引用接近100次）
2、基因分子进化：目前从事基因组变异与复杂性状形成的分子进化机制研究。代表性论
文：基因组变异与豆科植物根瘤固氮(MBE 2013，影响因子：14.308)、禾本科植物高
淀粉含量(MBE 2012,影响因子：10.353)和高蛋白质含量的分子进化机制
3、大豆遗传学：在TAG和Mol Breeding等发表论文多篇

学术等兼职
1、BMC Genetics Associate Editor 2011-
2、Canadian Journal of Plant Science Associate Editor 2011-2016
3、作物学报编委 2014-
4、Journal of Genetics Study Associate Editor 2012-
5、Frontiers in Statistical Genetics and Methodology Review Editor 2011-
6、Austin Biometrics and Biostatistics Associate Editor
7、南京农业大学学报（自然科学版）编委 2007.01~2016.12
8、江苏省第八届现场统计研究会理事 2013.11-2017.11

工作经历
1、华中农业大学植物科技学院教授，组建数量遗传学研究团队；
2、南京农业大学农学院作物遗传育种专业，历任副教授（1999）和教授（2002），从事
统计基因组学、基因分子进化和大豆遗传学研究工作；其中，2003-2005年在美国加州大学
Riverside分校做统计遗传与基因组学博士后：
3、西南大学荣昌分校，历任见习助教、助教（1987）、讲师（1992）、副教授（1995）；
从事生物统计学的教学与应用研究工作，曾任重庆市遗传学会常务理事、动物科学系主任助理和
副主任、重庆市荣昌县政协常委。

获奖情况
1、Outstanding Associate Editor Canadian Journal of Plant Science 2013
2、优秀硕士学位论文（李其刚）指导教师南京农业大学 2013
3、优秀硕士学位论文（徐宇）指导教师江苏省教育厅 2012
4、优秀博士学位论文（何小红）指导教师南京农业大学 2012
5、《生物统计与田间试验》国家精品课程负责人（第2）教育部 2007
6、教育部新世纪优秀人才支持计划获得者教育部 2005
7、江苏省优秀博士学位论文获得者江苏省教育厅 2004
8、南京农业大学优秀博士南京农业大学 2004
9、植物数量性状主基因-多基因遗传体系的分离分析方法教育部自然科学二等奖（第2） 2003
10、南京农业大学奖教金获得者南京农业大学 2000、2002
11、四川省优秀青年骨干教师四川省教委 1995

自1986年以来教学情况：
1、自1987年3月以来，主讲本科生课程《生物统计学》、《试验设计》、《非参数估计方法》；
2、自2005年以来，主讲研究生课程《数量遗传学》、《高级生物统计学》、《试验设计》、
《统计基因组学》、《遗传数据分析》和《作物学进展----比较基因组学与进化基因组学

科研项目1、主持华中农业大学引进人才项目1项
2、参加973项目2项(2006CB101708, 2011CB109300)
3、主持国家自然科学基金项目3项（30470998; 30671333; 30971848）；学术指导国家自然科学
基金项目4项（30900842; 31000666; 2013年两项）；
4、主持教育部新世纪优秀人才支持计划项目1项
5、主持教育部高校博士点基金项目3项
6、主持教育部与人事部留学回国人员启动基金项目各1项
7、主持江苏省自然科学基金项目2项、重庆市应用基础研究项目1项
8、主持中央高校基本科研业务费创新团队项目1项、参与中央高校基本科研业务费项目1项、
指导中央高校基本科研业务费项目2项
9、主持作物遗传与种质创新国家重点实验室自主创新项目1项

发明专利及获奖情况1、主持研制植物数量性状主基因+多基因混合遗传分析软件包SEA，近10余年来引用2000次以上；
（软件索取联系方式：soyzhang@mail.hzau.edu.cn）
2、偏分离群体连锁遗传图矫正软件包DistortedMap
(软件下载地址：http://www.nature.com/hdy/journal/v112/n5/suppinfo/hdy2013127s1.html)
3、NCII遗传交配设计QTL上位性检测windows界面软件包

发表的论文及著作主要英文论文（*：通讯作者；#：同等贡献）
2015
56 Zhou Ling (#), Wang Shi-Bo (#), Jian Jianbo (#), Geng Qing-Chun, Wen Jia, Song
Qijian, Wu Zhenzhen, Li Guang-Jun, Liu Yu-Qin, Jim M. Dunwell, Zhang Jin, Feng
Jian-Ying Feng, Niu Yuan, Zhang Li, Ren Wen-Long & Zhang Yuan-Ming (*). 2015.
Identification of domestication-related loci associated with flowering time and
seed size in soybean with the RAD-seq genotyping method. Scientific Reports 5:
9350 (DOI: 10.1038/srep09350) (2013 IF: 5.078)
55 Bu Su-Hong(#),Zhao Xinwang(#), Yi Can, Wen Jia, Tu Jinxing, Yuan-Ming Zhang*.
Interacted QTL mapping in partial NCII design provides evidences for breeding
by design. PLoS ONE 10(3):e0121034. doi:10.1371/journal.pone.0121034
2014
54 Xie F-T, Niu Y, Zhang J, Bu S-H, Zhang H-Z, Geng Q-C, Feng J-Y, Zhang Y-M*. 2014. Fine
mapping of quantitative trait loci for seed size traits in soybean. Molecular Breeding
34:2165-2178
53 Meng Li, Xiaolei Liu, Peter Bradbury, Jianming Yu, Yuan-Ming Zhang*, Rory J Todhunter,
Edward S Buckler,Zhiwu Zhang*. 2014. Enrichment of statistical power for genome-wide
association studies. BMC Biology 12:73 (2013 IF: 7.43)
52 Xie Shang-Qian, Feng Jian-Ying, Zhang Y-M*. 2014. Linkage group correction using epistatic
distorted markers in F2 and backcross populations. Heredity 112: 479-488
51 Zhang W-J, Niu Y, Bu S-H, Li M, Feng J-Y, Zhang J, Yang S-X, Medrine Mmyi Odinga, Wei
S-P, Liu X-F, Zhang Y-M*. 2014. Epistatic association mapping for alkaline and salinity
tolerance traits in the soybean germination stage. PLoS ONE 9(1): e84750
2013
50 Li Qi-Gang, Zhang Li, Li Chun, Zhang Y-M*. 2013. Comparative genomics suggests that an
ancestral polyploidy event leads to enhanced root nodule symbiosis in the Papilionoideae.
Molecular Biology and Evolution 30(12): 2602-2611 (2013 IF: 14.308)
49 Li Q-G, Zhang Y-M*. 2013. The origin and functional transition of P34. Heredity 110(3):
259-266
48 Wen Jia, Can Van Toan, Zhang Y-M*. 2013. Multi-QTL mapping for quantitative traits using
distorted markers. Molecular Breeding 31(2): 395-404
47 Niu Yuan, Xu Yu, Liu Xiao-Feng, Yang Sheng-Xian, Wei Shi-Ping, Xie Fang-Teng, Zhang Y-M*.
2013. Association mapping for seed size and shape traits in soybean cultivars. Molecular
Breeding 31(4): 785-794
46 Xie Shang-Qian, Jia Wen, Zhang Y-M*. 2013. Multi-QTL mapping for quantitative traits using
epistatic distorted markers. PLoS ONE 8(7): e68510
45 Feng J-Y, Zhang J, Zhang W-J, Wang S-B, Han S-F, Zhang Y-M*. 2013. An efficient
hierarchical generalized linear mixed model for mapping QTL of ordinal traits in crop
cultivars. PLoS ONE 8(4): e59541
44 Zhang T*, Qian N, Zhu X, Chen H, Wang S, Mei H, Zhang Y. 2013. Variations and transmission
of QTL alleles for yield and fiber qualities in upland cotton cultivars developed in China.
PLoS ONE 8(2): e57220
2012
43 Li C, Li Q-G, Jim M. Dunwell, Zhang Y-M*. 2012. Divergent evolutionary pattern of starch
biosynthetic pathway genes in grasses and dicots. Molecular Biology and Evolution 29(10):
3227- 3236 (2012 IF: 10.353)
42 Zhang J, Yue C, Zhang Y-M*. 2012. Bias correction for estimated QTL effects using the
penalized maximum likelihood method. Heredity 108: 396-402
41 Li C, Li M, Jim M. Dunwell, Zhang Y-M*. 2012. Gene duplication and accelerated
evolutionary rate contribute to the higher ability of protein synthesis in dicots.
BMC Evolutionary Biology 12: 15
40 He Xiao-Hong, Hu Zhongli, Zhang Y-M*. 2012. Genome-wide mapping of QTL associated with
heterosis in the RIL-based NCIII design. Chin Sci Bull 57(21): 2655-2665
39 Liu R, Wang B, Guo W, Qin Y, Wang L, Zhang Y, Zhang T*. 2012. Quantitative trait loci
mapping for yield and its components by using two immortalized populations of a
heterotic hybrid in Gossypium hirsutum L. Molecular Breeding 29(2): 297-311
38 Jiangbo Zhou, Yuan-Ming Zhang, Haiyan Lü, Aiqing You, Lili Zhu, Guangcun He*. 2012.
Transmission of important chromosomal regions under selection revealed in rice pedigree
breeding programs. Molecular Breeding 30(2): 717-729
37 Chen X, Guo W, Liu B, Zhang Y, Song X, Zhang L, Zhang T*. 2012. Molecular mechanisms of
fiber differential development between G. barbadense and G. hirsutum revealed by
genetical genomics. PLoS ONE 7(1): e30056
36 Guo H-L, Li Y, Xuan J-P, Liu J-X*, Zhang Y-M, Zheng Yi-Qi. 2012. Association of
molecular markers with cold tolerance and green period in Zoysiagrass (Zoysia Willd.).
Breeding Science 62: 320-327
2011
35 Li C, Zhang Y-M*. 2011. Molecular evolution of glycinin and β-conglycinin gene
families in soybean (Glycine max L. Merr.). Heredity 106: 633-641
34 Xu Y, Li H-N, Li G, Wang X, Cheng L, Zhang Y-M*. 2011. Mapping quantitative trait loci
for seed size traits in soybean (Glycine max L. Merr.). Theor Appl Genet, 122: 581-594
33 He X-H, Qin H, Hu Z, Zhang T, Zhang Y-M*. 2011. Mapping of epistatic quantitative trait
loci in four-way crosses. Theor Appl Genet 122: 33-48
32 Lü H-Y, Liu X-F, Wei S-P, Zhang Y-M*. 2011. Epistatic association mapping in homozygous
crop cultivars. PLoS ONE 6(3): e17773
31 He X-H, Zhang Y-M*. 2011. A complete solution for dissecting pure main and epistatic
effects of QTL in triple testcross design. PLoS ONE 6(9): e24575
30 Kuang F-L, Wang X, Zhou L, Zhang Y-M*. 2011. Linkage graph analysis: A linkage-group-based
QTL synthesis analysis approach. China Sci Bull 56: 1092-1099
29 Zhu X, Ai N, Zhang Y, Guo W, Zhang T-Z*. 2011. Relationships between differential gene
expression and heterosis in cotton hybrids developed from the foundation parent CRI-12 and
its pedigree-derived lines. Plant Science 180: 221-227
2010
28 Dou BD*, Hou BW, Wang F, Yang JB, Ni ZF, Sun QX, Zhang Y-M*. 2010. Further mapping of
quantitative trait loci for female sterility in wheat. Genetics Research 92(1): 63-70
27 Liu G, Li M, Wen J, Du Y, Zhang Y-M*. 2010. Functional mapping of quantitative trait
loci associated with rice tillering. Molecular Genetics and Genomics 284: 263-271
26 Li G-J, LI H-N, Cheng L-G, Zhang Y-M*. 2010. QTL Analysis for Dynamic Expression of
Chlorophyll Content in Soybean (Glycine max L. Merr.) Acta Agronomica Sinica 36(2):
242-248
2009
25 Lü H-Y, Li M, Yao L-L, Li G-J, Lin F, Zhang Y-M*. 2009. Multi-loci in silico mapping in
inbred lines. Heredity 103: 346-354
24 Zhang Y-M*, Gai JY. 2009. Methodologies for segregation analysis and QTL mapping in
plant.The third International Conference on Quantitative Genetics. Genetica 136: 311-318
2008
23 He X-H, Zhang Y-M*. 2008. Mapping epistatic quantitative trait loci underlying endosperm
traits using all markers on the entire genome in random hybridization design. Heredity 101:
39-47
22 Zhang Y-M*, Lü H-Y, Yao L-L. 2008. Multiple quantitative trait loci Haseman-Elston
regression using all markers on the entire genome. Theor Appl Genet 117: 683-690
21 Zhu C, Zhang Y-M*, Guo Z. 2008. Mapping quantitative trait loci for binary trait in the
F2:3 design. Journal of Genetics 87(3): 201-207
20 Qin H, Guo W, Zhang Y-M, Zhang TZ*. 2008. QTL mapping of yield and fiber traits based on
a four-way cross population in Gossypium hirsutum L. Theor Appl Genet 117: 883-894
2007
19 Zhu C, Wang C, Zhang Y-M*. 2007. Modeling segregation distortion for viability selection
I.Reconstruction of linkage maps with distorted markers. Theor Appl Genet 114: 295-305
18 Zhu C, Zhang Y-M*. 2007. An EM algorithm for mapping segregation distortion loci. BMC
Genetics 8: 82
17 Zhu C, Huang J, Zhang Y-M*. 2007. Mapping binary trait loci in the F2:3 design. Journal
of Heredity 98:337-344
16 Geng J, Zhu C, Zhang X, Cheng Y, Zhang Y-M*, Hou X*. 2007. A genetic linkage map of
nonheading chinese cabbage. Journal of American Society for Horticultural Science
132: 816-823
15 Zhu C, Wang F, Wang J，Li G，Zhang H*, Zhang Y-M*. 2007. Reconstruction of linkage maps
in the segregation populations of backcross, double haploid and recombinant inbred line.
Chin Sci Bull 52: 1648-1653
14 Wang X, Hu Z, Wang W, Li Y, Zhang Y-M, Xu C*. 2007. A mixture model approach to the
mapping of QTL controlling endosperm traits with bulked samples Status. Genetica 132:
59-70
2006
13 Zhang Y-M*. 2006. Advances on methods for mapping QTL in plants. China Sci Bull 51:
2223-2231
12 Zhang Y-M*. 2006. Shrinkage estimation method for mapping multiple quantitative trait
loci.Acta Genetica Sinica 33(10): 861-869
11 Xue Y, Wan J*, Jiang L, Wang C, Liu L, Zhang Y-M, Zhai H. 2006. Identification of
quantitative trait loci associated with aluminum tolerance in rice (Oryza sativa L.).
Euphytica 150: 37-45
2005
10 Zhang Y-M, Mao Y, Xie C, Smith H, Luo L, Xu S*. 2005. Mapping quantitative trait loci
using naturally occurring genetic variance among commercial inbred lines of maize (Zea
mays L.). Genetics 169: 2267-2275
9 Wang H, Zhang Y-M, Li X, Masinde GL, Mohan S, Baylink DJ, Xu S*. 2005. Bayesian
shrinkage estimation of quantitative trait loci parameters. Genetics 170: 465-480
(Comment: Nat Rev Genet 2006, 7: 229-237)
8 Zhang Y-M, Xu S*. 2005. A penalized maximum likelihood method for estimating
epistatic effects of QTL. Heredity 95: 96-104
7 Luo L, Zhang Y-M, Xu S*. 2005. A quantitative genetics model for viability selection.
Heredity 94: 347-355 (Editor Comment: Heredity 2005 94: 273-274)
6 Xu C, Zhang Y-M, Xu S*. 2005. An EM algorithm for mapping quantitative resistance
loci.Heredity 94: 119-128
5 Zhang Y-M, Xu S*. 2005. Advanced statistical methods for detecting multiple
quantitative trait loci. Recent Research Developments in Genetics and Breeding 2:
1-23 (Invited Review)
4 Hansen C, Yi N, Zhang Y-M, Xu S, Gavora J, Cheng HH*. 2005. Identification of QTL for
production traits in chickens. Animal Biotechnology 16: 67-79
2004
3 Zhang Y-M, Xu S*. 2004. Mapping quantitative trait loci in F2 incorporating phenotypes
of F3 progeny. Genetics 166: 1981-1993
2003
2 Zhang Y-M*, Gai JY, Yang Y-H. 2003. The EIM algorithm in the joint segregation analysis
of quantitative traits. Genetics Research 81: 157-163
1 Tao A, Zeng H, Zhang Y-M，Xie G-S, Qin F-L, Zheng Y-L, Zhang D-P*. 2003. Genetic
analysis of the low critical sterility temperature point in photoperiod-thermo sensitive
genic male sterile rice. Acta Genetica Sinica 30(1): 40-48

2009年以来的中文学术论文（2009年以前的中文论文未列入）
1 程利国, 李广军, 刘玉芹, 李河南，章元明. 大豆对大豆花叶病毒Sa 株系抗扩展特性的遗传分析.
南京农业大学学报, 2009, 32(4): 13 17
2 李河南，汪霞，李广军，程利国，何小红，张国政，章元明。大豆粒形的主基因+多基因混合遗传。
大豆科学 2009，28(1): 16-20
3 李广军，李河南，程利国，章元明。大豆对豆卷叶螟抗性的QTL定位。中国油料作物学报 2009，
31(3): 365-369
4 匡峰磊, 汪霞, 周玲, 章元明。关联图分析: 一种基于连锁图的QTL 综合分析方法。科学通报
2010，55(29): 2828-2836
5 李广军，李河南，程利国，章元明。大豆叶绿素含量动态表达的QTL 分析。作物学报 2010，
36(2): 242-248
6 汪霞，徐宇，李广军，李河南，艮文全，章元明。大豆百粒重QTL 定位。作物学报 2010，
36(10): 1674-1682
7 魏世平，刘晓芬，杨胜先，吕海燕，牛远，章元明。中国栽培大豆群体结构不同分类方法的比较.
南京农业大学学报 2011, 34(2):13-17
8 汪霞，徐宇，李广军，李河南，章元明。大豆株高QTL 定位及Meta 分析. 南京农业大学学报
2011, 34(3): 13-19
9 章元明. 植物数量遗传学的建立、发展与展望. 南京农业大学学报 2012, 35(5): 19-24
10 牛远，徐宇，李广军，王云清，刘晓芬，李河南，魏世平，章元明。大豆籽粒大小和粒形的驯化
研究。大豆科学 2012，31(4): 522-528
11 曹锡文，刘兵，章元明. 植物数量性状分离分析Windows 软件包SEA 的研制。南京农业大学学报
2013, 36(6): 1-6
12 闫宁，谢尚潜，耿青春，徐宇，李广军，刘兵，汪霞，李其刚，章元明。利用Bayes 分层广义
线性模型剖析大豆籽粒性状的遗传基础。作物学报 2013，39(2): 258-268
13 牛远，谢芳腾，布素红，谢尚潜，韩世凤，耿青春，刘兵，章元明。大豆粒形性状QTL 的精细
定位。作物学报 2013，39(4): 609-616

教材与专著
1、Zhang Y-M*. 2012. F2 designs for QTL analysis. In: Scott A. Rifkin (ed.), Quantitative
Trait Loci (QTL): Methods and Protocols. Methods in Molecular Biology 871: 17-29.
DOI 10.1007/978- 1-61779-785-9_2.Springer Science + Business Media, LLC
2、盖钧镒、章元明、王建康。植物数量性状遗传体系。科学出版社，2003
3、谢庄、章元明主编。水产试验统计学。中国农业科技出版社，1998
4、盖钧镒主编，章元明统稿。试验统计方法。农业出版社，2000
5、章元明主编。生物统计学（生物技术专业用）。农业出版社（待出版）
6、徐辰武、章元明主编。生物统计与试验设计。高等教育出版社（待出版）